INFO I692 Fall 2014

Thesis/Project in Bioinformatics

INFO I692 Fall 2014

Course description

INFO I692 Thesis Preparation

Lecture times and locations

Wed 11:00a-11:55a, Simon Hall (SI) 030

Tentative schedule

HTML version of this schedule

DAY DATE LECTURE TOPIC LECTURER

Wed Aug 27 1.1 Orientation
Orientation slides Volker Brendel

Wed Sept 3 2.1 An introduction to bioinformatics record keeping using "make"
Watch this! Daniel Standage

Wed Sept 10 2.2 Bioinformatics record keeping: "make" workflows
Daniel Standage

Wed Sept 17 3.1 Review of research project areas Students

Wed Sept 24 no meeting

Wed Oct 1 no meeting

Wed Oct 8 no meeting

Wed Oct 15 no meeting

Wed Oct 22 4.1 Research project presentations Hussein_Mohsen
Saranya_Sankaranarayanan

Wed Oct 29 4.2 Research project presentations Vineela_Gangalapudi
Gayathri_Rajan

Wed Dec 17 5.1 Final project presentation:
A machine learning pipeline to improve De Bruijn graph metatranscriptomic assemblies Hussein_Mohsen
(H. Tang group)

DAY	DATE	LECTURE	TOPIC	LECTURER
Wed	Aug 27	1.1	Orientation Orientation slides	Volker Brendel
Wed	Sept 3	2.1	An introduction to bioinformatics record keeping using "make" Watch this!	Daniel Standage
Wed	Sept 10	2.2	Bioinformatics record keeping: "make" workflows	Daniel Standage
Wed	Sept 17	3.1	Review of research project areas	Students
Wed	Sept 24		no meeting
Wed	Oct 1		no meeting
Wed	Oct 8		no meeting
Wed	Oct 15		no meeting
Wed	Oct 22	4.1	Research project presentations	Hussein_Mohsen Saranya_Sankaranarayanan
Wed	Oct 29	4.2	Research project presentations	Vineela_Gangalapudi Gayathri_Rajan
Wed	Dec 17	5.1	Final project presentation: A machine learning pipeline to improve De Bruijn graph metatranscriptomic assemblies	Hussein_Mohsen (H. Tang group)