Bioinformatics2go

What's New

Group:

V. Brendel serving as Chair of the iPlant Collaborative Scientific Advisory Board

V. Brendel appointed Consulting Editor of The Plant Cell

Recent publications:

Duvick, J., Standage, D.S., Merchant, N. & Brendel, V.P. (2016) xGDBvm: A Web GUI-driven workflow for annotating eukaryotic genomes in the cloud. The Plant Cell [Advance Publication: 28 March 2016]

Standage, D.S., Berens, A.J., Glastad, K.M., Severin, A.J., Brendel, V.P. & Toth, A.L. (2016) Genome, transcriptom and methylome sequencing of a primitively eusocial wasp reveal a greatly reduced DNA methylaiton system in a social insect. Molecular Ecology [First published: 15 March 2016]

PlantGDB News:

xGDBvm on YouTube

Bioinformatics2go

GeneSeqer



Description: A spliced alignment tool.

Citation: Brendel, V., Xing, L. & Zhu, W. (2004) Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus. Bioinformatics 20, 1157-1169. [PubMed ID: 14764557] [PDF]

Web Implementations: GeneSeqer @ USD GeneSeqer @ PlantGDB

Download: Download GeneSeqer